BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033D03LP1|AL429725
(907 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1250 1754 0.0
>3x_Contig1250
Length = 5563
Score = 1754 bits (883), Expect = 0.0
Identities = 903/909 (99%), Gaps = 2/909 (0%)
Strand = Plus / Minus
Query: 1 tatcgagattaatactgaagctttas-ttacttgacattgaagccctctgtcagagtctt 59
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 4042 tatcgagattaatactgaagctttagcttacttgacattgaagccctctgtcagagtctt 3983
Query: 60 gctacgaggtaacggtgatgtatgtttgaaaataatcgagctgatcaagtcacaggacac 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3982 gctacgaggtaacggtgatgtatgtttgaaaataatcgagctgatcaagtcacaggacac 3923
Query: 120 tacaccgactgatctatacggactcttgattatattagcaaacgtaagtaagcacccgtc 179
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 3922 tacaccgactgatctatacggactcttgattatattagcaaacgtaagtgagcacccgtc 3863
Query: 180 acagaatgaggatacagtcgataaattaaaagcttcattgaaaaccaaccaagaaaagaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3862 acagaatgaggatacagtcgataaattaaaagcttcattgaaaaccaaccaagaaaagaa 3803
Query: 240 tgacgagccgacattggaaaatgttaaggacatagaagagtttaaccgtgattatattat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3802 tgacgagccgacattggaaaatgttaaggacatagaagagtttaaccgtgattatattat 3743
Query: 300 cgatttagacttgatcggttctttaaaatcgataaaactatccacctcatcttacaatca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3742 cgatttagacttgatcggttctttaaaatcgataaaactatccacctcatcttacaatca 3683
Query: 360 agccataagaatcatatataatgtgacaagagataaaacacagatatcagaatgtgtgaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3682 agccataagaatcatatataatgtgacaagagataaaacacagatatcagaatgtgtgaa 3623
Query: 420 acagggtgctggattgatgctcttggtatttttagcacaaaaaaggaacctttctaaaga 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3622 acagggtgctggattgatgctcttggtatttttagcacaaaaaaggaacctttctaaaga 3563
Query: 480 tgaatggtatcttctatcgataagagcactatcgaaaacactcatctatgtgaatccaga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3562 tgaatggtatcttctatcgataagagcactatcgaaaacactcatctatgtgaatccaga 3503
Query: 540 gactgcgttcagcaaatattcaccgttgagcgca-saccgttcttatttgaaaatttacc 598
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 3502 gactgcgttcagcaaatattcaccgttgagcgcagcaccgttcttatttgaaaatttacc 3443
Query: 599 tttaccaaatgacaacgctttatcggaacttcaattcacacaattagatacttacgaagc 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3442 tttaccaaatgacaacgctttatcggaacttcaattcacacaattagatacttacgaagc 3383
Query: 659 attattagcgttgacaaatttggctactataaaccagggagtagatctcggcaaaatcat 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3382 attattagcgttgacaaatttggctactataaaccagggagtagatctcggcaaaatcat 3323
Query: 719 cttgagtwatgctcagtattgggatagtatagagaatctcttattggattcatcggtcag 778
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3322 cttgagtaatgctcagtattgggatagtatagagaatctcttattggattcatcggtcag 3263
Query: 779 aattcaaagatcgacattagaacttatttccaatttaatgtccaatccaatggctatctc 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3262 aattcaaagatcgacattagaacttatttccaatttaatgtccaatccaatggctatctc 3203
Query: 839 tgcaaagttcttctgctttgaaaaccctaagagtgcacagaatttcgaaatactggtcaa 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3202 tgcaaagttcttctgctttgaaaaccctaagagtgcacagaatttcgaaatactggtcaa 3143
Query: 899 gcttctcga 907
|||||||||
Sbjct: 3142 gcttctcga 3134
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6774
Number of Sequences: 1807
Number of extensions: 6774
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 907
length of database: 10,358,551
effective HSP length: 16
effective length of query: 891
effective length of database: 10,329,639
effective search space: 9203708349
effective search space used: 9203708349
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)